nanover.mdanalysis package

Module providing conversion and utility methods for working with NanoVer and MDAnalysis.

Submodules

• nanover.mdanalysis.converter module
  • FrameDataField
    • FrameDataField.key
    • FrameDataField.required
  • FrameDataFieldConversion
    • FrameDataFieldConversion.converter
    • FrameDataFieldConversion.key
  • add_frame_positions_to_mda()
  • add_frame_topology_to_mda()
  • add_mda_positions_to_frame_data()
  • add_mda_topology_to_frame_data()
  • frame_data_to_mdanalysis()
  • mdanalysis_to_frame_data()
  • nullable_int()
  • update_universe_from_framedata()
• nanover.mdanalysis.simulation module
  • UniverseSimulation
    • UniverseSimulation.advance_by_one_step()
    • UniverseSimulation.advance_by_seconds()
    • UniverseSimulation.from_universe()
    • UniverseSimulation.load()
    • UniverseSimulation.make_regular_frame()
    • UniverseSimulation.make_topology_frame()
    • UniverseSimulation.playback_factor
    • UniverseSimulation.reset()
    • UniverseSimulation.simulation_time
• nanover.mdanalysis.universe module
  • KeyConversion
    • KeyConversion.attribute
    • KeyConversion.conversion
  • NanoverParser
    • NanoverParser.parse()
  • NanoverReader
  • NanoverReaderBase
    • NanoverReaderBase.close()
    • NanoverReaderBase.n_frames
    • NanoverReaderBase.units
  • batched()
  • explosion_mask()
  • has_topology()
  • is_valid_first_frame()
  • universe_from_recording()
  • universes_from_recording()